diff --git a/cli/factory.rs b/cli/factory.rs
index 6e340c3c0d..32cb256a3f 100644
--- a/cli/factory.rs
+++ b/cli/factory.rs
@@ -773,7 +773,9 @@ impl CliFactory {
       self.feature_checker().clone(),
       self.create_cli_main_worker_options()?,
       self.options.node_ipc_fd(),
-      self.options.disable_deprecated_api_warning,
+      // TODO(bartlomieju): temporarily disabled
+      // self.options.disable_deprecated_api_warning,
+      true,
       self.options.verbose_deprecated_api_warning,
     ))
   }
diff --git a/cli/standalone/mod.rs b/cli/standalone/mod.rs
index 6859c6a620..0175b9c119 100644
--- a/cli/standalone/mod.rs
+++ b/cli/standalone/mod.rs
@@ -541,7 +541,9 @@ pub async fn run(
       maybe_root_package_json_deps: package_json_deps_provider.deps().cloned(),
     },
     None,
-    metadata.disable_deprecated_api_warning,
+    // TODO(bartlomieju): temporarily disabled
+    // metadata.disable_deprecated_api_warning,
+    true,
     false,
   );
 
diff --git a/cli/tests/integration/run_tests.rs b/cli/tests/integration/run_tests.rs
index 0b9f50fc37..d722b23c77 100644
--- a/cli/tests/integration/run_tests.rs
+++ b/cli/tests/integration/run_tests.rs
@@ -5216,35 +5216,36 @@ itest!(unstable_temporal_api_missing_flag {
   exit_code: 1,
 });
 
-itest!(warn_on_deprecated_api {
-  args: "run -A run/warn_on_deprecated_api/main.js",
-  output: "run/warn_on_deprecated_api/main.out",
-  http_server: true,
-  exit_code: 0,
-});
+// TODO(bartlomieju): temporary disabled
+// itest!(warn_on_deprecated_api {
+//   args: "run -A run/warn_on_deprecated_api/main.js",
+//   output: "run/warn_on_deprecated_api/main.out",
+//   http_server: true,
+//   exit_code: 0,
+// });
 
-itest!(warn_on_deprecated_api_verbose {
-  args: "run -A run/warn_on_deprecated_api/main.js",
-  output: "run/warn_on_deprecated_api/main.verbose.out",
-  envs: vec![("DENO_VERBOSE_WARNINGS".to_string(), "1".to_string())],
-  http_server: true,
-  exit_code: 0,
-});
+// itest!(warn_on_deprecated_api_verbose {
+//   args: "run -A run/warn_on_deprecated_api/main.js",
+//   output: "run/warn_on_deprecated_api/main.verbose.out",
+//   envs: vec![("DENO_VERBOSE_WARNINGS".to_string(), "1".to_string())],
+//   http_server: true,
+//   exit_code: 0,
+// });
 
-itest!(warn_on_deprecated_api_with_flag {
-  args: "run -A --quiet run/warn_on_deprecated_api/main.js",
-  output: "run/warn_on_deprecated_api/main_disabled_flag.out",
-  http_server: true,
-  exit_code: 0,
-});
+// itest!(warn_on_deprecated_api_with_flag {
+//   args: "run -A --quiet run/warn_on_deprecated_api/main.js",
+//   output: "run/warn_on_deprecated_api/main_disabled_flag.out",
+//   http_server: true,
+//   exit_code: 0,
+// });
 
-itest!(warn_on_deprecated_api_with_env_var {
-  args: "run -A run/warn_on_deprecated_api/main.js",
-  envs: vec![("DENO_NO_DEPRECATION_WARNINGS".to_string(), "1".to_string())],
-  output: "run/warn_on_deprecated_api/main_disabled_env.out",
-  http_server: true,
-  exit_code: 0,
-});
+// itest!(warn_on_deprecated_api_with_env_var {
+//   args: "run -A run/warn_on_deprecated_api/main.js",
+//   envs: vec![("DENO_NO_DEPRECATION_WARNINGS".to_string(), "1".to_string())],
+//   output: "run/warn_on_deprecated_api/main_disabled_env.out",
+//   http_server: true,
+//   exit_code: 0,
+// });
 
 #[test]
 fn deno_json_imports_expand() {