2023-06-05 12:24:04 -04:00
|
|
|
---
|
|
|
|
title: 'CRAN Package Registry'
|
|
|
|
license: 'Apache-2.0'
|
2023-09-22 13:20:11 -04:00
|
|
|
origin_url: 'https://github.com/go-gitea/gitea/blob/8d9e2d07f3f84a86265fdbe0ab7fcf63cc34ddbd/docs/content/usage/packages/cran.en-us.md'
|
2023-06-05 12:24:04 -04:00
|
|
|
---
|
|
|
|
|
|
|
|
Publish [R](https://www.r-project.org/) packages to a [CRAN](https://cran.r-project.org/)-like registry for your user or organization.
|
|
|
|
|
|
|
|
## Requirements
|
|
|
|
|
|
|
|
To work with the CRAN package registry, you need to install [R](https://cran.r-project.org/).
|
|
|
|
|
|
|
|
## Configuring the package registry
|
|
|
|
|
|
|
|
To register the package registry you need to add it to `Rprofile.site`, either on the system-level, user-level (`~/.Rprofile`) or project-level:
|
|
|
|
|
|
|
|
```
|
|
|
|
options("repos" = c(getOption("repos"), c(forgejo="https://forgejo.example.com/api/packages/{owner}/cran")))
|
|
|
|
```
|
|
|
|
|
|
|
|
| Parameter | Description |
|
|
|
|
| --------- | ------------------------- |
|
|
|
|
| `owner` | The owner of the package. |
|
|
|
|
|
|
|
|
If you need to provide credentials, you may embed them as part of the url (`https://user:password@forgejo.example.com/...`).
|
|
|
|
|
|
|
|
## Publish a package
|
|
|
|
|
|
|
|
To publish a R package, perform a HTTP `PUT` operation with the package content in the request body.
|
|
|
|
|
|
|
|
Source packages:
|
|
|
|
|
|
|
|
```
|
|
|
|
PUT https://forgejo.example.com/api/packages/{owner}/cran/src
|
|
|
|
```
|
|
|
|
|
|
|
|
| Parameter | Description |
|
|
|
|
| --------- | ------------------------- |
|
|
|
|
| `owner` | The owner of the package. |
|
|
|
|
|
|
|
|
Binary packages:
|
|
|
|
|
|
|
|
```
|
|
|
|
PUT https://forgejo.example.com/api/packages/{owner}/cran/bin?platform={platform}&rversion={rversion}
|
|
|
|
```
|
|
|
|
|
|
|
|
| Parameter | Description |
|
|
|
|
| ---------- | ---------------------------- |
|
|
|
|
| `owner` | The owner of the package. |
|
|
|
|
| `platform` | The name of the platform. |
|
|
|
|
| `rversion` | The R version of the binary. |
|
|
|
|
|
|
|
|
For example:
|
|
|
|
|
|
|
|
```shell
|
|
|
|
curl --user your_username:your_password_or_token \
|
|
|
|
--upload-file path/to/package.zip \
|
|
|
|
https://forgejo.example.com/api/packages/testuser/cran/bin?platform=windows&rversion=4.2
|
|
|
|
```
|
|
|
|
|
|
|
|
You cannot publish a package if a package of the same name and version already exists. You must delete the existing package first.
|
|
|
|
|
|
|
|
## Install a package
|
|
|
|
|
|
|
|
To install a R package from the package registry, execute the following command:
|
|
|
|
|
|
|
|
```shell
|
|
|
|
install.packages("{package_name}")
|
|
|
|
```
|
|
|
|
|
|
|
|
| Parameter | Description |
|
|
|
|
| -------------- | ----------------- |
|
|
|
|
| `package_name` | The package name. |
|
|
|
|
|
|
|
|
For example:
|
|
|
|
|
|
|
|
```shell
|
|
|
|
install.packages("testpackage")
|
|
|
|
```
|