- Databases are one of the most important parts of Forgejo, every
interaction with Forgejo uses the database in one way or another.
Therefore, it is important to maintain the database and recognize when
Forgejo is not doing well with the database. Forgejo already has the
option to log *every* SQL query along with its execution time, but
monitoring becomes impractical for larger instances and takes up
unnecessary storage in the logs.
- Add a QoL enhancement that allows instance administrators to specify a
threshold value beyond which query execution time is logged as a warning
in the xorm logger. The default value is a conservative five seconds to
avoid this becoming a source of spam in the logs.
- The use case for this patch is that with an instance the size of Codeberg, monitoring SQL logs is not very fruitful and most of them are uninteresting. Recently, in the context of persistent deadlock issues (https://codeberg.org/forgejo/forgejo/issues/220), I have noticed that certain queries hold locks on tables like comment and issue for several seconds. This patch helps to identify which queries these are and when they happen.
- Added unit test.
(cherry picked from commit 24bbe7886f)
(cherry picked from commit 6e29145b3c)
(cherry picked from commit 63731e3071)
(cherry picked from commit 3ce1a09736)
(cherry picked from commit a64426907d)
(cherry picked from commit 4b19215691)
(cherry picked from commit e635674435)
(cherry picked from commit 9cf501f1af)
(cherry picked from commit 0d6b934eba)
(cherry picked from commit 4b6c273879)
(cherry picked from commit b50517139c)
(cherry picked from commit 6546dd1fc9)
(cherry picked from commit 3eda6890e6)
[GITEA] Add slow SQL query warning (squash) document the setting
(cherry picked from commit ce38599c51)
(cherry picked from commit 794aa67c68)
(cherry picked from commit 8227673deb)
(cherry picked from commit 8854d1d4dd)
(cherry picked from commit 9121a0e21f)
(cherry picked from commit 41bae2e425)
Fixes #25564
Fixes #23191
- Api v2 search endpoint should return only the latest version matching
the query
- Api v3 search endpoint should return `take` packages not package
versions
The xorm `Sync2` has already been deprecated in favor of `Sync`,
so let's do the same inside the Gitea codebase.
Command used to replace everything:
```sh
for i in $(ag Sync2 --files-with-matches); do vim $i -c ':%sno/Sync2/Sync/g' -c ':wq'; done
```
Fix #24662.
Replace #24822 and #25708 (although it has been merged)
## Background
In the past, Gitea supported issue searching with a keyword and
conditions in a less efficient way. It worked by searching for issues
with the keyword and obtaining limited IDs (as it is heavy to get all)
on the indexer (bleve/elasticsearch/meilisearch), and then querying with
conditions on the database to find a subset of the found IDs. This is
why the results could be incomplete.
To solve this issue, we need to store all fields that could be used as
conditions in the indexer and support both keyword and additional
conditions when searching with the indexer.
## Major changes
- Redefine `IndexerData` to include all fields that could be used as
filter conditions.
- Refactor `Search(ctx context.Context, kw string, repoIDs []int64,
limit, start int, state string)` to `Search(ctx context.Context, options
*SearchOptions)`, so it supports more conditions now.
- Change the data type stored in `issueIndexerQueue`. Use
`IndexerMetadata` instead of `IndexerData` in case the data has been
updated while it is in the queue. This also reduces the storage size of
the queue.
- Enhance searching with Bleve/Elasticsearch/Meilisearch, make them
fully support `SearchOptions`. Also, update the data versions.
- Keep most logic of database indexer, but remove
`issues.SearchIssueIDsByKeyword` in `models` to avoid confusion where is
the entry point to search issues.
- Start a Meilisearch instance to test it in unit tests.
- Add unit tests with almost full coverage to test
Bleve/Elasticsearch/Meilisearch indexer.
---------
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
releated to #21820
- Split `Size` in repository table as two new colunms, one is `GitSize`
for git size, the other is `LFSSize` for lfs data. still store full size
in `Size` colunm.
- Show full size on ui, but show each of them by a `title`; example:
- Return full size in api response.
---------
Signed-off-by: a1012112796 <1012112796@qq.com>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Co-authored-by: silverwind <me@silverwind.io>
Co-authored-by: DmitryFrolovTri <23313323+DmitryFrolovTri@users.noreply.github.com>
Co-authored-by: Giteabot <teabot@gitea.io>
The recent change on xorm for `Sync` is it will not warn when database
have columns which is not listed on struct. So we just need this warn
logs when `Sync` the whole database but not in the migrations Sync.
This PR will remove almost unnecessary warning logs on migrations.
Now below logs in CI will disappear.
```log
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column creator_id but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column is_closed but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column board_type but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column type but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column closed_date_unix but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column created_unix but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column updated_unix but struct has not related field
2023/06/23 17:51:32 models/db/engine.go:191:InitEngineWithMigration() [W] Table gtestschema.project has column card_type but struct has not related field
```
Before, Gitea shows the database table stats on the `admin dashboard`
page.
It has some problems:
* `count(*)` is quite heavy. If tables have many records, this blocks
loading the admin page blocks for a long time
* Some users had even reported issues that they can't visit their admin
page because this page causes blocking or `50x error (reverse proxy
timeout)`
* The `actions` stat is not useful. The table is simply too large. Does
it really matter if it contains 1,000,000 rows or 9,999,999 rows?
* The translation `admin.dashboard.statistic_info` is difficult to
maintain.
So, this PR uses a separate page to show the stats and removes the
`actions` stat.
## ⚠️ BREAKING
The `actions` Prometheus metrics collector has been removed for the
reasons mentioned beforehand.
Please do not rely on its output anymore.
## ⚠️ Breaking
The `log.<mode>.<logger>` style config has been dropped. If you used it,
please check the new config manual & app.example.ini to make your
instance output logs as expected.
Although many legacy options still work, it's encouraged to upgrade to
the new options.
The SMTP logger is deleted because SMTP is not suitable to collect logs.
If you have manually configured Gitea log options, please confirm the
logger system works as expected after upgrading.
## Description
Close #12082 and maybe more log-related issues, resolve some related
FIXMEs in old code (which seems unfixable before)
Just like rewriting queue #24505 : make code maintainable, clear legacy
bugs, and add the ability to support more writers (eg: JSON, structured
log)
There is a new document (with examples): `logging-config.en-us.md`
This PR is safer than the queue rewriting, because it's just for
logging, it won't break other logic.
## The old problems
The logging system is quite old and difficult to maintain:
* Unclear concepts: Logger, NamedLogger, MultiChannelledLogger,
SubLogger, EventLogger, WriterLogger etc
* Some code is diffuclt to konw whether it is right:
`log.DelNamedLogger("console")` vs `log.DelNamedLogger(log.DEFAULT)` vs
`log.DelLogger("console")`
* The old system heavily depends on ini config system, it's difficult to
create new logger for different purpose, and it's very fragile.
* The "color" trick is difficult to use and read, many colors are
unnecessary, and in the future structured log could help
* It's difficult to add other log formats, eg: JSON format
* The log outputer doesn't have full control of its goroutine, it's
difficult to make outputer have advanced behaviors
* The logs could be lost in some cases: eg: no Fatal error when using
CLI.
* Config options are passed by JSON, which is quite fragile.
* INI package makes the KEY in `[log]` section visible in `[log.sub1]`
and `[log.sub1.subA]`, this behavior is quite fragile and would cause
more unclear problems, and there is no strong requirement to support
`log.<mode>.<logger>` syntax.
## The new design
See `logger.go` for documents.
## Screenshot
<details>
</details>
## TODO
* [x] add some new tests
* [x] fix some tests
* [x] test some sub-commands (manually ....)
---------
Co-authored-by: Jason Song <i@wolfogre.com>
Co-authored-by: delvh <dev.lh@web.de>
Co-authored-by: Giteabot <teabot@gitea.io>
Add test coverage to the important features of
[`routers.web.repo.renderReadmeFile`](067b0c2664/routers/web/repo/view.go (L273));
namely that:
- it can handle looking in docs/, .gitea/, and .github/
- it can handle choosing between multiple competing READMEs
- it prefers the localized README to the markdown README to the
plaintext README
- it can handle broken symlinks when processing all the options
- it uses the name of the symlink, not the name of the target of the
symlink
Replace #23350.
Refactor `setting.Database.UseMySQL` to
`setting.Database.Type.IsMySQL()`.
To avoid mismatching between `Type` and `UseXXX`.
This refactor can fix the bug mentioned in #23350, so it should be
backported.
When we updated the .golangci.yml for 1.20 we should have used a string
as 1.20 is not a valid number.
In doing so we need to restore the nolint markings within the pq driver.
Signed-off-by: Andrew Thornton <art27@cantab.net>
This PR fixes two problems. One is when filter repository issues, only
repository level projects are listed. Another is if you list open
issues, only open projects will be displayed in filter options and if
you list closed issues, only closed projects will be displayed in filter
options.
In this PR, both repository level and org/user level projects will be
displayed in filter, and both open and closed projects will be listed as
filter items.
---------
Co-authored-by: John Olheiser <john.olheiser@gmail.com>
Co-authored-by: zeripath <art27@cantab.net>
Co-authored-by: delvh <dev.lh@web.de>
Related to #22362.
I overlooked that there's always `committer.Close()`, like:
```go
ctx, committer, err := db.TxContext(db.DefaultContext)
if err != nil {
return nil
}
defer committer.Close()
// ...
if err != nil {
return nil
}
// ...
return committer.Commit()
```
So the `Close` of `halfCommitter` should ignore `commit and close`, it's
not a rollback.
See: [Why `halfCommitter` and `WithTx` should rollback IMMEDIATELY or
commit
LATER](https://github.com/go-gitea/gitea/pull/22366#issuecomment-1374778612).
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Some dbs require that all tables have primary keys, see
- #16802
- #21086
We can add a test to keep it from being broken again.
Edit:
~Added missing primary key for `ForeignReference`~ Dropped the
`ForeignReference` table to satisfy the check, so it closes #21086.
More context can be found in comments.
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: zeripath <art27@cantab.net>
Change all license headers to comply with REUSE specification.
Fix #16132
Co-authored-by: flynnnnnnnnnn <flynnnnnnnnnn@github>
Co-authored-by: John Olheiser <john.olheiser@gmail.com>
This PR adds a context parameter to a bunch of methods. Some helper
`xxxCtx()` methods got replaced with the normal name now.
Co-authored-by: delvh <dev.lh@web.de>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Fix #19513
This PR introduce a new db method `InTransaction(context.Context)`,
and also builtin check on `db.TxContext` and `db.WithTx`.
There is also a new method `db.AutoTx` has been introduced but could be used by other PRs.
`WithTx` will always open a new transaction, if a transaction exist in context, return an error.
`AutoTx` will try to open a new transaction if no transaction exist in context.
That means it will always enter a transaction if there is no error.
Co-authored-by: delvh <dev.lh@web.de>
Co-authored-by: 6543 <6543@obermui.de>
A lot of our code is repeatedly testing if individual errors are
specific types of Not Exist errors. This is repetitative and unnecesary.
`Unwrap() error` provides a common way of labelling an error as a
NotExist error and we can/should use this.
This PR has chosen to use the common `io/fs` errors e.g.
`fs.ErrNotExist` for our errors. This is in some ways not completely
correct as these are not filesystem errors but it seems like a
reasonable thing to do and would allow us to simplify a lot of our code
to `errors.Is(err, fs.ErrNotExist)` instead of
`package.IsErr...NotExist(err)`
I am open to suggestions to use a different base error - perhaps
`models/db.ErrNotExist` if that would be felt to be better.
Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: delvh <dev.lh@web.de>
Related:
* #21362
This PR uses a general and stable method to generate resource index (eg:
Issue Index, PR Index)
If the code looks good, I can add more tests
ps: please skip the diff, only have a look at the new code. It's
entirely re-written.
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
A testing cleanup.
This pull request replaces `os.MkdirTemp` with `t.TempDir`. We can use the `T.TempDir` function from the `testing` package to create temporary directory. The directory created by `T.TempDir` is automatically removed when the test and all its subtests complete.
This saves us at least 2 lines (error check, and cleanup) on every instance, or in some cases adds cleanup that we forgot.
Reference: https://pkg.go.dev/testing#T.TempDir
```go
func TestFoo(t *testing.T) {
// before
tmpDir, err := os.MkdirTemp("", "")
require.NoError(t, err)
defer os.RemoveAll(tmpDir)
// now
tmpDir := t.TempDir()
}
```
Signed-off-by: Eng Zer Jun <engzerjun@gmail.com>
This PR adds a new manager command to switch on SQL logging and to turn it off.
```
gitea manager logging log-sql
gitea manager logging log-sql --off
```
Signed-off-by: Andrew Thornton <art27@cantab.net>
